ANU Supercomputer Facility - Annual Report 1997

Publications

 

The Following papers by Supercomputer Facility staff members and closely related staff were published or in press in 1997. Papers by non-ANUSF members of the Fujitsu Mathematics Project and the Computational Chemistry project are not listed here.
Papers Published

C. Alcock, R. A. Allsman, D. R. Alves, T. S. Axelrod, A. C. Becker, D. P. Bennett, K. H. Cook, K. C. Freeman, K. Griest, J. Guern, M. J. Lehner, S. L. Marshall, D. Minniti, B. A. Peterson, M. R. Pratt, P. J. Quinn, A. W. Rodgers, W. Sutherland, and D. L. Welch (The MACHO Collaboration), The MACHO Project Large Magellanic Cloud Variable Star Inventory. III. Multimode RR Lyrae Stars, Distance to the Large Magellanic Cloud, and Age of the Oldest Stars , ApJ, 482, 89 (1997).

C. Alcock, R. A. Allsman, D. R. Alves, T. S. Axelrod, A. C. Becker, D. P. Bennett, P. A. Charles, K. H. Cook, K. C. Freeman, K. Griest, J. Guern, M. J. Lehner, M. Livio, S. L. Marshall, B. A. Peterson, M. R. Pratt, P. J. Quinn, A. W. Rodgers, K. A. Southwell, C. W. Stubbs, and W. Sutherland (The MACHO Collaboration), The X-ray off-state of the supersoft source CAL 83 and its interpretation, MNRAS, 286, 483 (1997).

C. Alcock, R. A. Allsman, D. Alves, T. S. Axelrod, D. P. Bennett, K. H. Cook, K. C. Freeman, K. Griest, J. Guern, M. J. Lehner, S. L. Marshall, H. S. Park, S. Perlmutter, B. A. Peterson, M. R. Pratt, P. J. Quinn, A. W. Rodgers, C. W. Stubbs, and W. Sutherland (The MACHO Collaboration), The MACHO Project: 45 Candidate Microlensing Events from the First-Year Galactic Bulge Data, ApJ, 479, 119 (1997).

C. Alcock, R. A. Allsman, D. Alves, T. S. Axelrod, D. P. Bennett, P. A. Charles, K. H. Cook, D. O'Donoghue, K. C. Freeman, K. Griest, J. Guern, M. J. Lehner, M. Livio, S. L. Marshall, D. Minniti, B. A. Peterson, M. R. Pratt, P. J. Quinn, A. W. Rodgers, K. A. Southwell, C. W. Stubbs, W. Sutherland and D. L. Welch (The MACHO Collaboration), Optical photometry of the eclipsing Large Magellanic Cloud supersoft source CAL 87, MNRAS, 287, 699 (1997).

C. Alcock, R. A. Allsman, D. Alves, T. S. Axelrod, A. C. Becker, D. P. Bennett, K. H. Cook, K. C. Freeman, K. Griest, J. Guern, M. J. Lehner, S. L. Marshall, D. Minniti, B. A. Peterson, M. R. Pratt, P. J. Quinn, A. W. Rodgers, C. W. Stubbs, W. Sutherland and D. L. Welch (The MACHO Collaboration), MACHO Project Photometry of RR Lyrae Stars in the Sagittarius Dwarf Galaxy, ApJ, 474, 217 (1997).

C. Alcock, R. A. Allsman, D. R. Alves, T. S. Axelrod, A. C. Becker, D. P. Bennett, K. H. Cook, K. C. Freeman, K. Griest, M. J. Lehner, S. L. Marshall, D. Minniti, B. A. Peterson, M. R. Pratt, P. J. Quinn, A. W. Rodgers, C. W. Stubbs, W. Sutherland, A. Tomaney, T. Vandehei, and D. L. Welch (The MACHO Collaboration) Is the Large Magellanic Cloud Microlensing Due to an Intervening Dwarf Galaxy?, ApJ, 490, 159 Nov 1997.

H. J. Gardner and C. M. Savage, Computational Physics-Ninth Physics Summer School World Scientific Pub. Co., ISBN 981-02-3058-3 (1997) 210 pages.

H. J. Gardner, The PUPPY Paradigm, Computational Science and Engineering IEEE Comput. Sci. and Eng. 4, 3 (1997) 4-8.

R. L. Dewar, P. Cuthbert, J. V. L. Lewandowski, and H. J. Gardner, Calculation of Global Modes via Ballooning Formalisms, J. Korean Phys. Soc. 31 (1997) S115-S118.

R. L. Dewar, P. Cuthbert, J. L. V. Lewandowski, H. J. Gardner, D. B. Singleton, N. Nakajima, M. Persson and W. A. Cooper, Calculation of Global Modes via Ballooning Formalisms, J. Korean Phys. Soc. (Proc. Supp.) pp 115-118, vol. 31, Aug. 1997.

D. L. Harrar II and M. H. Kahn, Efficient Solution of Symmetric/Hermitian Eigenvalue Problems on Procesors Parallel Arrays of Vector, Computational Techniques and Applications Conference (CTAC97), 1997, World Scientific.

R. Kobayashi and A. P. Rendell, A Direct Coupled Cluster Algorithm for Massively Parallel Computers, Chem. Phys. Lett., 265, 1 (1997).

G. D. Fletcher, A. P. Rendell and P. Sherwood, A Parallel Second-order Moller-Plesset Gradient, Molecular Physics, 91, 431 (1997).

Conference and other Publications

A. Bliznyuk, A. C. Limaye and A. P. Rendell, Does Molecular Modelling still need Supercomputers?, Third Australian Molecular Modelling Workshop, Melbourne, 5th - 7th October 1997.

A. Bliznyuk and J. E. Gready, A new VDW-FFT Method for Docking Small Ligands to Proteins, Third Australian Molecular Modelling Workshop, Melbourne, 5th - 7th October 1997.

A. Bliznyuk, A. C. Limaye and A. P. Rendell, Computational Chemistry on Fujitsu Parallel Supercomputers, Parallel Computing Workshop PCW97, 25-26 Sept. 1997.

P. Cuthbert, R. L. Dewar, H. J. Gardner, V. L. J. Lewandowski, M. Persson, D. B. Singleton, W.A. Cooper, Global Ballooning Mode Amplitude and Phase Structure in a Stellarator, 21st AINSE Plasma Science and Technology Conference, Lucas Heights, Feb 17-18 1997.

S. A. Dettrick and H. J. Gardner, Neoclassical Ambipolar Radial Electric Fields in H-1, 21st AINSE Plasma Science and Technology Conference, Lucas Heights, Feb 17-18 1997.

S. S. Lloyd, S. A. Dettrick, R.L Dewar and H. J. Gardner, Approximate Adiabatic Invariants: A Way of Predicting and Classifying Orbits, 21st AINSE Plasma Science and Technology Conference, Lucas Heights, Feb 17-18 1997.

S. A. Dettrick, and H. J. Gardner, Portable MPMD Implementation of a Monte Carlo Neoclassical Plasma Transport Code, 21st AINSE Plasma Science and Technology Conference, Lucas Heights, Feb 17-18 1997.

H. J. Gardner, S. S. Lloyd, S. R. Hudson and T. Hayashi, Magnetic Islands in the H-1NF Heliac, 21st AINSE Plasma Science and Technology Conference, Lucas Heights, Feb 17-18 1997.

H. J. Gardner, The Appropriate Reality Theatre for Visualising Large Data Sets, 4th Int. Conf. on Comput. Phys., Singapore, June 2-4 1997.

H. J. Gardner, Virtual Reality for Plasma Physics, 2nd Asia Pacific Plasma Theory Conference, National Institute for Fusion Science, Toki, Japan, 24-26 Sept 1997.

S. A. Dettrick, H. J. Gardner, R. L. Dewar, Drift Surface Geometry, Trapped Populations and Radial Electric Fields in the H-1 Heliac, 2nd Asia Pacific Plasma Theory Conference, National Institute for Fusion Science, Toki, Japan, 24-26 Sept 1997.

P. Cuthbert, L. V. J. Lewandowski, R. L. Dewar, H. J. Gardner, D. B. Singleton, N. Nakajima, M. Persson, W. A. Cooper, Discrete and Continuum Ballooning Modes in a Stellarator , 11th International Stellarator Conference, Toki-City, Japan, Sept 29 - Oct 3 1997.

S. A. Dettrick, H. J. Gardner, R. L. Dewar, Ambipolar Radial Electric Fields and Confinement in the H-1 Heliac, 11th International Stellarator Conference, Toki-City, Japan, Sept 29 - Oct 3 1997.

S. S. Lloyd, H. J. Gardner, T. Hayashi, S. R. Hudson, Self-Healing of Magnetic Islands in a Heliac , 11th International Stellarator Conference, Toki-City, Japan, Sept 29 - Oct 3 1997.

S. Zimin, R. C. Cross, R. L. Dewar and H. J. Gardner, Stellarator Fusion Neutronics Research in Australia , Nuclear Science and Engineering in Australia 1997, Lucas Heights Oct 16-17 1997.

H. J. Gardner and D. B. Singleton, Supercomputer Design and Analysis of Stellarator Fusion Experiments, Fujitsu International Supercomputer Users Conference, Hawaii, Nov 11-14 1997.

H. J. Gardner, The Puppy Paradigm in Computational Engineering, SC'97, San Jose, Ca, USA, Nov 17-21, 1997.

R. L. Dewar, P. Cuthbert, J. L. V. Lewandowski, H. J. Gardner, D. B. Singleton, N. Nakajima, M. Persson and W.A. Cooper, Discrete and Continuum Ballooning Modes in a Stellarator, Proceedings of Toki/ITC conference, Toki-city, Japan, 30 Sept.-3 Oct., 1997.

J. H. Jenkinson, The RASH Resource Accounting Shell and Job Scheduling at the ANU, Fujitsu International Supercomputer Users Conference, Hawaii, Nov 11-14 1997.

D. L. Harrar II, M. H. Kahn and M.R. Osborne, Parallel Eigenvalue Routines on the Fujitsu VPP300, Parallel Computing Workshop PCW97, 25-26 Sept. 1997.

S. P. Greatbanks, J. E. Gready, A. C. Limaye, and A. P. Rendell, Computational Studies of Polarisation in the Reaction Mechanism of the Enzyme Dihydrofolate Reductase, American Chemical Society National Meeting, Las Vagas, 7-11 Septmeber 1997.

S. P. Greatbanks, J. E. Gready, A. C. Limaye and A. P. Rendell, Computational Studies of Polarisation in the Reaction Mechanism of the Enzyme Dihydrofolate Reductase, Third Australian Molecular Modelling Workshop, Melbourne, 5th - 7th October 1997.

O. Nielsen, G. Mercer and M. Hegland, 1997, Vector-Parallel Fast Wavelet Transforms, Proceedings of the Parallel Computing Workshop PCW97, P1-S-2-8, 25-26 Sept 1997, ANU, Canberra.

Papers Submitted or In Press

M. L. Dow, Sparse Inverse and Characteristic Polynomial of Generalized Arrow Matrix, submitted to J Australian Mathematical Society Series B.

P. Cuthbert, J. L. V. Lewandowski, H. J. Gardner, M. Persson, D. B. Singleton, R. L. Dewar, N. Nakajima, W. A. Cooper, Toroidally Localized and Nonlocalized Ballooning Instabilities in a Stellarator, submitted to Physics of Plasmas.

D. Harrar and M. Kahn, On the Efficient Solution of Symmetric/Hermitian Eigenvalue Problems on Parallel Arrays of Vector Processors, presented at the Computational Techniques and Applications Conference, CTAC97, University of Adelaide, 29 Sept - 1 Oct 1997. To appear in the CTAC97 Proceedings, World Scientific.

M. Hegland, M. H. Kahn, M. R. Osborne, A Parallel Algorithm for the Reduction to Tridiagonal Form for Eigendecomposition, revised version submitted to SIAM J. Sci. Computing.

M. J. Wolf, L. S. Jermiin, S. Easteal, M. H. Kahn and B.D. McKay, TrExML - a Maximum Likelihood Program for Exhaustive Tree-Space Exploration, submitted to CABIOS, Computer Applications in the Biosciences.

S. R. Gadre, S. S. Pundlik, A. C. Limaye and A. P. Rendell, Electrostatic Investigation of Metal Cation binding to DNA Bases and Base Pairs, Chemical Communications (in press).

S. L. Sandow, D. Whitehouse, and C. E. Hill, Specialised Sympathetic Neuroeffector Associations in Rat Iris Arterioles, Journal of Anatomy (in press).


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