**Appendix A ANU VP2200 and CM-5 Individual Research
Reports**

This section presents individual reports on internal projects
supported by the Time Allocation Committee on the VP2200 and the
CM-5. The reports were prepared by the individual principal investigators
in a standard format. In some cases several projects are combined
into a single report. At the time of going to press reports had
not been received for a small number of projects.

Zero-noise Limit of Three-dimensional Laplacian Growth Processes

Integer Factorization Algorithms

Propagation of Highly Nonlinear Solitary Waves in Stratified Shear Flows

Permeation of Ions through Membrane Channnels

Molecular Potential Energy Surfaces by Interpolation

Model Simulations of B-DNA Dynamics

QM/MM Calculations on Solvated Molecules

3D MHD Equilibrium and Stability and Simulation of Neoclassical Plasma Transport

Plasma Turbulence in 3-dimensional Magnetically Confined Plasmas

Transport Processes in Liquids of Flexible Chain Molecules/Molecular Dynamics on the CM-5

The Study of the Process of Gelation Using Parallel Molecular Dynamics Programs

Strain Rate Dependence of Heat Transfer as Applied to Planar Poiseuille Flow

Calculation of the Stability of Phase Space Trajectories using Molecular Dynamic Simulations

Structures and Vibrational Frequencies of Pure Halocarbon Clusters and Mixed Clusters with Water

Energies and Potential Surfaces of the Excited Electronic States
of the Triazines**.**

3-D Modeling of Seismic Save Propagation

A Combined Molecular Biological and Computer Graphics Study of Biologically Active Proteins

Enzyme-ligand Docking and Design

Definition of the Chemical Mechanism of the Photosynthetic Enzyme Rubisco

Parallel/Vector Implementations of Algorithms for the Solution of PDEs

Non-equilibrium Re-entry Flows (CFD Validation)

Molecular Dynamics Simulation of Carrier Dynamics in Semiconductors

Coupling Surface Hydrology Models to the CCM

Dynamic Separation of Catchment Water Balance

Flow and Fracture in Heterogeneous Materials

Mechanical and Transport Properties of Model Bicontinuous Materials

Investigation of Collective Nuclei in the SDG Interacting Boson Model

Mantle Viscosity, Glacial Rebound and Sea-Level Change

Mantle Plumes

Towards a Modelocked Waveguide Laser

Dark Optical Solitons and Soliton Induced Waveguides

A Spatial Model of Community dynamics in Patchy Landscapes

Dynamics of Mistletoe Invasion of Fragmented Woodlands

Protein Refinement and Engineering

Computational Quantum Chemistry

Regioselectivity of Enolate Alkylations

Modelling Atom optics

Efficient Calculation of Statistical and Dynamical Reaction Rates for Large Dimensional Molecular Systems

A 3-D Tropospheric Transport and Chemistry Model

Climatic Effects of Biomass Burning

Climate Studies with the CCM2 - Controls for the Present Day Climate

Mesoscale Meteorological Modelling

Chemistry of Ozone and Carbon Monoxide

Computation of W-ray Diffraction Patterns for 3D Model Systems