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The dimensions of the selectivity filter are determined by
the strength of hydrogen bonds and van der Waals
interactions with the remainder of the channel protein.
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It will be seen that these "molecular springs" are the key
to the functionality of this biological ion channel. For
simplicity, we only show that part of the protein forming
the selectivity filter.
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The conduit formed by the four peptide chains is lined
with carbonyl oxygen atoms, shown here in red.
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A succession of carbonyl oxygen rings appears as an ion
traverses the selectivity filter.
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